BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C11LP1|AL427605
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1236 1749 0.0
>3x_Contig1236
Length = 4331
Score = 1749 bits (860), Expect = 0.0
Identities = 923/966 (95%), Gaps = 1/966 (0%)
Strand = Plus / Plus
Query: 3 tccatgtkaaattcaaaaagaacaagaaattgctcaagctgccaaattggaggaattgat 62
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 tccaagtgaaattcaaaaagaacaagaaattgctcaagctgccaaattggaggaattgat 2074
Query: 63 aagacgtggtaaacctgkagatttgagggaagccaacaaattgatgaaggtcatggccgg 122
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2075 aagacgtggtaaacctgaagatttgagggaagccaacaaattgatgaaggtcatggccgg 2134
Query: 123 attcaaggaagacaacatgattcaktctaagcagatcttaaatkawgaattaaccaaact 182
|||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 2135 attcaaggaagacaacatgattcagtctaagcagatcttaaatgaagaattaaccaaact 2194
Query: 183 aagacgtaaggcagacttgttgaacgawatgttagggaccaacgactcaccagatataga 242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2195 aagacgtaaggcagacttgttgaacgaaatgttagggaccaacgactcaccagatataga 2254
Query: 243 wwatkawacaattgtcgaactatatwatkctttawkgtcatcacagccaagattccaaaw 302
|| | |||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 2255 aaatgaaacaattgtcgaactatataatgctttaaggtcatcacagccaagattccaaaa 2314
Query: 303 wattatcgaggaagaacacgatgacgwtkaatttktccaggatttactcaagttcaatga 362
||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||
Sbjct: 2315 aattatcgaggaagaacacgatgacgatgaatttgtccaggatttactcaagttcaatga 2374
Query: 363 tacggtcaaccaattggttcaawagtatgatttattgatagcwggacatgctggtgaagc 422
|||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 2375 tacggtcaaccaattggttcaaaagtatgatttattgaaagcaggacatgctggtgaagc 2434
Query: 423 aaatcaaattaatgtcgatwacatttcctcatctgttaatwatkgtggtgcgttaccaat 482
||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||
Sbjct: 2435 aaatcaaattaatgtcgataacatttcctcatctgttaataatggtggtgcgttagcaat 2494
Query: 483 kawatwwatttwattgatttttatgacgaakaagttaatwwwakttcttcttcaaattct 542
| || |||| ||||||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 2495 gaaataaatttgattgattttgatgacgaagaagttaataaaagttcttcttcaaattct 2554
Query: 543 actgctgctgctgccagatacaatttakawgatgacctgttgagcggtctgaatgacttg 602
|||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 2555 actgctgctgctgccagaaacaatttagaagatgacctgttgagcggtctgaatgacttg 2614
Query: 603 aatttctctgacaacaacaacaacaacaacaactttggatttgggggcagcatagccttg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2615 aatttctctgacaacaacaacaacaacaacaactttggatttgggggcagcatagccttg 2674
Query: 663 gacacagcagctcatgcatctcctgccgtacctgttaccacaactaccacaaccaactca 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2675 gacacagcagctcatgcatctcctgccgtacctgttaccacaactaccacaaccaactca 2734
Query: 723 aatttcgatctgttgagtgatctatcatcaccatcacctgtccaagctcaacaagatact 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2735 aatttcgatctgttgagtgatctatcatcaccatcacctgtccaagctcaacaagatact 2794
Query: 783 catagcaatgacttattgagtgagttttcagcaccagccgttcaacattctactcaacct 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2795 catagcaatgacttattgagtgagttttcagcaccagccgttcaacattctactcaacct 2854
Query: 843 tccatagtgtctgaccgtttccttgtaaaccagtcagatgttttgaagtttgaatttgca 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2855 tccatagtgtctgaccgtttccttgtaaaccagtcagatgttttgaagtttgaatttgca 2914
Query: 903 atttctagagaatcagaaa-caccatcaargtgacttctttcttttcaaatgtgtcaatt 961
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2915 atttctagagaatcagaaagcaccatcaaggtgacttctttcttttcaaatgtgtcaatt 2974
Query: 962 tcgcaa 967
||||||
Sbjct: 2975 tcgcaa 2980
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8533
Number of Sequences: 1807
Number of extensions: 8533
Number of successful extensions: 792
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)